Recent Publications
- Type I Interferon Transcriptional Network Regulates Expression of Coinhibitory Receptors in Human T cells.
Hafler D, Sumida T, Dulberg S, Schupp J, Stillwell H, Axisa PP, Comi M, Lincoln M, Unterman A, Kaminski N, Madi A, Kuchroo V
Research square. 2021 Jun 8
PMID: 34127967
- Longitudinal shear stress response in human endothelial cells to atheroprone and atheroprotective conditions.
Maurya MR, Gupta S, Li JY, Ajami NE, Chen ZB, Shyy JY, Chien S, Subramaniam S
Proceedings of the National Academy of Sciences of the United States of America. 2021 Jan 26
PMID: 33468662
- JAK-inhibitor and type I interferon ability to produce favorable clinical outcomes in COVID-19 patients: a systematic review and meta-analysis.
Walz L, Cohen AJ, Rebaza AP, Vanchieri J, Slade MD, Dela Cruz CS, Sharma L
BMC infectious diseases. 2021 Jan 11
PMID: 33430799
- Comprehensive analysis of COVID-19 during pregnancy.
Moore KM, Suthar MS
Biochemical and biophysical research communications. 2021 Jan 29
PMID: 33384142
- Mass Cytometry Defines Virus-Specific CD4+ T Cells in Influenza Vaccination.
Subrahmanyam PB, Holmes TH, Lin D, Su LF, Obermoser G, Banchereau J, Pascual V, García-Sastre A, Albrecht RA, Palucka K, Davis MM, Maecker HT
ImmunoHorizons. 2020 Dec 11
PMID: 33310880
- Mouse Adapted SARS-CoV-2 protects animals from lethal SARS-CoV challenge.
Muruato A, Vu MN, Johnson BA, Davis-Gardner ME, Vanderheiden A, Lokugmage K, Schindewolf C, Crocquet-Valdes PA, Langsjoen RM, Plante JA, Plante KS, Weaver SC, Debbink K, Routh AL, Walker D, Suthar MS, Xie X, Shi PY, Menachery VD
bioRxiv : the preprint server for biology. 2021 May 4
PMID: 33972939
- In-Depth Analysis of Genetic Variation Associated with Severe West Nile Viral Disease.
Cahill ME, Loeb M, Dewan AT, Montgomery RR
Vaccines. 2020 Dec 8
PMID: 33302579
- The immunology of SARS-CoV-2 infections and vaccines.
Grigoryan L, Pulendran B
Seminars in immunology. 2020 Aug
PMID: 33262067
- Development of a Rapid Focus Reduction Neutralization Test Assay for Measuring SARS-CoV-2 Neutralizing Antibodies.
Vanderheiden A, Edara VV, Floyd K, Kauffman RC, Mantus G, Anderson E, Rouphael N, Edupuganti S, Shi PY, Menachery VD, Wrammert J, Suthar MS
Current protocols in immunology. 2020 Dec
PMID: 33215858
- Oleic acid restores suppressive defects in tissue-resident FOXP3 Tregs from patients with multiple sclerosis.
Pompura SL, Wagner A, Kitz A, LaPerche J, Yosef N, Dominguez-Villar M, Hafler DA
The Journal of clinical investigation. 2021 Jan 19
PMID: 33170805
- NEBULA is a fast negative binomial mixed model for differential or co-expression analysis of large-scale multi-subject single-cell data.
He L, Davila-Velderrain J, Sumida TS, Hafler DA, Kellis M, Kulminski AM
Communications biology. 2021 May 26
PMID: 34040149
- Divergent and self-reactive immune responses in the CNS of COVID-19 patients with neurological symptoms.
Song E, Bartley CM, Chow RD, Ngo TT, Jiang R, Zamecnik CR, Dandekar R, Loudermilk RP, Dai Y, Liu F, Sunshine S, Liu J, Wu W, Hawes IA, Alvarenga BD, Huynh T, McAlpine L, Rahman NT, Geng B, Chiarella J, Goldman-Israelow B, Vogels CBF, Grubaugh ND, Casanovas-Massana A, Phinney BS, Salemi M, Alexander JR, Gallego JA, Lencz T, Walsh H, Wapniarski AE, Mohanty S, Lucas C, Klein J, Mao T, Oh J, Ring A, Spudich S, Ko AI, Kleinstein SH, Pak J, DeRisi JL, Iwasaki A, Pleasure SJ, Wilson MR, Farhadian SF
Cell reports. Medicine. 2021 May 18
PMID: 33969321
- A 20-year historical review of West Nile virus since its initial emergence in North America: Has West Nile virus become a neglected tropical disease?
Ronca SE, Ruff JC, Murray KO
PLoS neglected tropical diseases. 2021 May
PMID: 33956816
- Immune Responses to SARS-CoV-2 in Solid Organ Transplant Recipients.
Phadke VK, Scanlon N, Jordan SC, Rouphael NG
Current transplantation reports. 2021 Mar 4
PMID: 33688459
- Shared B cell memory to coronaviruses and other pathogens varies in human age groups and tissues.
Yang F, Nielsen SCA, Hoh RA, Röltgen K, Wirz OF, Haraguchi E, Jean GH, Lee JY, Pham TD, Jackson KJL, Roskin KM, Liu Y, Nguyen K, Ohgami RS, Osborne EM, Nadeau KC, Niemann CU, Parsonnet J, Boyd SD
Science (New York, N.Y.). 2021 May 14
PMID: 33846272
- Systems Immunology: Revealing Influenza Immunological Imprint.
Tomic A, Pollard AJ, Davis MM
Viruses. 2021 May 20
PMID: 34065617
- Neutralizing Antibodies Against SARS-CoV-2 Variants After Infection and Vaccination.
Edara VV, Hudson WH, Xie X, Ahmed R, Suthar MS
JAMA. 2021 May 11
PMID: 33739374
- AgBR1 and NeSt1 antisera protect mice from Aedes aegypti-borne Zika infection.
Marin-Lopez A, Wang Y, Jiang J, Ledizet M, Fikrig E
Vaccine. 2021 Mar 19
PMID: 33622591
- The humoral immune response to high-dose influenza vaccine in persons with monoclonal B-cell lymphocytosis (MBL) and chronic lymphocytic leukemia (CLL).
Whitaker JA, Parikh SA, Shanafelt TD, Kay NE, Kennedy RB, Grill DE, Goergen KM, Call TG, Kendarian SS, Ding W, Poland GA
Vaccine. 2021 Feb 12
PMID: 33461835
- Cutting Edge: Severe SARS-CoV-2 Infection in Humans Is Defined by a Shift in the Serum Lipidome, Resulting in Dysregulation of Eicosanoid Immune Mediators.
Schwarz B, Sharma L, Roberts L, Peng X, Bermejo S, Leighton I, Casanovas-Massana A, Minasyan M, Farhadian S, Ko AI, Yale IMPACT Team., Dela Cruz CS, Bosio CM
Journal of immunology (Baltimore, Md. : 1950). 2021 Jan 15
PMID: 33277388
- Systems biological assessment of human immunity to BNT162b2 mRNA vaccination.
Pulendran B, Arunachalam PS
Research square. 2021 Apr 22
PMID: 34013244
- Auto-antibodies to type I IFNs can underlie adverse reactions to yellow fever live attenuated vaccine.
Bastard P, Michailidis E, Hoffmann HH, Chbihi M, Le Voyer T, Rosain J, Philippot Q, Seeleuthner Y, Gervais A, Materna M, de Oliveira PMN, Maia MLS, Dinis Ano Bom AP, Azamor T, Araújo da Conceição D, Goudouris E, Homma A, Slesak G, Schäfer J, Pulendran B, Miller JD, Huits R, Yang R, Rosen LB, Bizien L, Lorenzo L, Chrabieh M, Erazo LV, Rozenberg F, Jeljeli MM, Béziat V, Holland SM, Cobat A, Notarangelo LD, Su HC, Ahmed R, Puel A, Zhang SY, Abel L, Seligman SJ, Zhang Q, MacDonald MR, Jouanguy E, Rice CM, Casanova JL
The Journal of experimental medicine. 2021 Apr 5
PMID: 33544838
- Injectable Hydrogels for Sustained Codelivery of Subunit Vaccines Enhance Humoral Immunity.
Roth GA, Gale EC, Alcántara-Hernández M, Luo W, Axpe E, Verma R, Yin Q, Yu AC, Lopez Hernandez H, Maikawa CL, Smith AAA, Davis MM, Pulendran B, Idoyaga J, Appel EA
ACS central science. 2020 Oct 28
PMID: 33145416
- Infection- and vaccine-induced antibody binding and neutralization of the B.1.351 SARS-CoV-2 variant.
Edara VV, Norwood C, Floyd K, Lai L, Davis-Gardner ME, Hudson WH, Mantus G, Nyhoff LE, Adelman MW, Fineman R, Patel S, Byram R, Gomes DN, Michael G, Abdullahi H, Beydoun N, Panganiban B, McNair N, Hellmeister K, Pitts J, Winters J, Kleinhenz J, Usher J, O'Keefe JB, Piantadosi A, Waggoner JJ, Babiker A, Stephens DS, Anderson EJ, Edupuganti S, Rouphael N, Ahmed R, Wrammert J, Suthar MS
Cell host & microbe. 2021 Apr 14
PMID: 33798491
- Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models.
Xu C, Lopez R, Mehlman E, Regier J, Jordan MI, Yosef N
Molecular systems biology. 2021 Jan
PMID: 33491336
- Longitudinal analysis shows durable and broad immune memory after SARS-CoV-2 infection with persisting antibody responses and memory B and T cells.
Cohen KW, Linderman SL, Moodie Z, Czartoski J, Lai L, Mantus G, Norwood C, Nyhoff LE, Edara VV, Floyd K, De Rosa SC, Ahmed H, Whaley R, Patel SN, Prigmore B, Lemos MP, Davis CW, Furth S, O'Keefe J, Gharpure MP, Gunisetty S, Stephens KA, Antia R, Zarnitsyna VI, Stephens DS, Edupuganti S, Rouphael N, Anderson EJ, Mehta AK, Wrammert J, Suthar MS, Ahmed R, McElrath MJ
medRxiv : the preprint server for health sciences. 2021 Apr 27
PMID: 33948610
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